Molecular Biology of the Fission Yeast

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Eukaryotic Pathogen Database Resources More EuPathDB i. Schizosaccharomyces pombe database More PomBase i. Phosphothreonine 1 Publication Manual assertion based on experiment in i Ref.

Phosphoserine 1 Publication Manual assertion based on experiment in i Ref. MaxQB i. PaxDb, a database of protein abundance averages across all three domains of life More PaxDb i. PRIDE i. BioGrid i. Protein interaction database and analysis system More IntAct i. Molecular INTeraction database More MINT i. SMR i.

Database of comparative protein structure models More ModBase i. InParanoid i. OMA i. Database for complete collections of gene phylogenies More PhylomeDB i. Integrated resource of protein families, domains and functional sites More InterPro i. Pfam protein domain database More Pfam i. Zhang, Z. Nonsense-mediated decay targets have multiple sequence-related features that can inhibit translation. Regulation of transcriptome, translation, and proteome in response to environmental stress in fission yeast.

MacKay, V. Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone. Proteomics 3 , — Preiss, T.


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Homodirectional changes in transcriptome composition and mRNA translation induced by rapamycin and heat shock. Wood, V. PomBase: a comprehensive online resource for fission yeast. Nucleic Acids Res. The genome sequence of Schizosaccharomyces pombe.

A large gene family in fission yeast encodes spore killers that subvert Mendel’s law | eLife

Ma, J. Unconventional genomic architecture in the budding yeast Saccharomyces cerevisiae masks the nested antisense gene NAG1. Cell 7 , — Galindo, M. Peptides encoded by short ORFs control development and define a new eukaryotic gene family.

Molecular Biology of the Fission Yeast

PLoS Biol. Kondo, T. Small peptide regulators of actin-based cell morphogenesis encoded by a polycistronic mRNA. Cell Biol. Magny, E. Conserved regulation of cardiac calcium uptake by peptides encoded in small open reading frames. Kelly, M. Four mating-type genes control sexual differentiation in the fission yeast. Hood, H. Evolutionary roles of upstream open reading frames in mediating gene regulation in fungi. Jackson, R. The mechanism of eukaryotic translation initiation and principles of its regulation. Slavoff, S. Peptidomic discovery of short open reading frame—encoded peptides in human cells.

Shimoda, C.

Cloning and analysis of transcription of the mei2 gene responsible for initiation of meiosis in the fission yeast Schizosaccharomyces pombe. Kim, D. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Open source clustering software. Bioinformatics 20 , — Eisen, M. Cluster analysis and display of genome-wide expression patterns. USA 95 , — Saldanha, A.

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Java Treeview: extensible visualization of microarray data. Download references.

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We thank J. Jackson for comments on the manuscript. Correspondence to Juan Mata. To obtain permission to re-use content from this article visit RightsLink. Expert Review of Proteomics This is a preview of subscription content, log in to check access. Egel R Mating-type genes, meiosis and sporulation. Egel R Mapping additional markers in fission yeast, especially fusi and three mfm genes.

Egel R The synaptonemal complex and the distribution of meiotic recombination events. Egel R Fission yeast on the brink of meiosis. Egel R, Holmberg S Cultivation of yeast cells. In: Celis J ed Cell biology: a laboratory handbook, 2nd edn. Academic Press, San Diego, pp.

Groenewald M, Viljoen-Bloom M Factors involved in the regulation of the Schizosaccharomyces pombe malic enzyme gene. In: King RC ed Handbook of genetics, vol 1. Kippert F, Hunt P Ultradian clocks in eukaryotic microbes: from behavioural observation to functional genomics. Kohli J, Nurse P Genetic nomenclature guide.